Preparation of 1X Reagent Diluent

1. Label an appropriate sized bottle as “1X Reagent Diluent”.

2. Dilute 2X Reagent Diluent to 1X by adding 30mL of 2X Reagent Diluent to 30mL of lab grade water in the bottle labeled “1XReagentDiluent”.

3. Mix well by vortex.

Preparation of 1X Wash Buffer

1. Label a 1L bottle as “1X Wash Buffer”.

2. Dilute 5X Wash Buffer 1:5 using lab grade water* and mix well.

Thaw down On ice monomer/sonicated fibril preparation aliquots stored at -80°C

-Synuclein protein expression and purification

Preparation of mouse and human α-synuclein fibrils

Measure monomer concentration via Nanodrop

Add Amount of 5x, 10x or 20x diluted aliquots in PBS onto nanodrop piedestal;

Parameters: other proteins; coefficient extinction:

5.98; MW: 14.4 kDA for human a-synuclein

7.45; MW: 14.4 kDA for mouse a-synuclein

Perform two measurements for each dilution and confirm <10% standard error between two measurements

For fibril preparations, dilute in 6M guanidine HCL and follow the aforementioned instructions derscribed for monomeric protein

Equipment

Value	Label
NanoDrop™ One/OneC Microvolume UV-Vis Spectrophotometer	NAME
UV-Vis Spectrophotometer	TYPE
Thermo Scientific	BRAND
ND-ONE-W	SKU
http://www.thermofisher.com/us/en/home.html	LINK

Use 1X Reagent Diluent to prepare the standard intermediates as follows:

Assay reaction 0 : dilute monomer stock to a concentration 50ng/mL 50ng/mL

Assay reaction // Volume of standard (uL) // Volume of 1X reagent diluent (uL) // Final concentration (pg/mL)

          1                           40 uL of \#0                                1280                                                     1500   



          2                         550 uL of \#1                                825                                                         600



          3                         550 uL of \#2                                825                                                         240                            



          4                         550 uL of \#3                                825                                                         96.0



          5                         550 uL of \#4                                825                                                         38.4



          6                         550 uL of \#5                                825                                                         15.4



          7                         550 uL of \#6                                825                                                         6.1



          8                                  0                                           825                                                           0

Dilute samples in 1X Reagent Diluent; if correct dilution is unknown - prepare a standard dilutions as follows: 10X; 20X, 40x;100X; 500X;

Once evaluated - use correct dilution factor to run an experiment;

Minimum recommended dilution is 1:10 ;

we recommend dilution for neuronal lysates to be set at 1:100

Remove the plate from the foil pouch.

Add 300µL of 1X Wash Buffer (use multichannel pipette and ELISA racks to easily access the wash buffer).

Dump out wash buffer and pat dry.

Repeat 3 more times for a total of 4 washes.

Add 50 μL of 1X Reagent Diluent to each well that will contain either standard dilutions or samples.

Add 50µL of each standard to the plate in duplicate or triplicate. Follow the plate layout below.

Note: The volumes in Table 2 are sufficient for running the standard curve in triplicate.

Add 50µL of each sample dilution to the plate.

Cover the plate with the plate sealer provided and i ncubate for 2 hours at , with shaking 2-8Room temperature, with shaking

EXAMPLE LAYOUT:

Add 100µL μL of α-Synuclein Aggregate Detection Antibody to each well, seal the plate, and incubate at room temperature for 1 hour with shaking.

Dump the content of the plate and repeat

Dump the content and add Avidin-HRP 100µL to each used well, cover and incubate for 0h 30m 0s at Room temperature

Remove plate from incubation and dump components; repeat

Discard the contents of the plate into a sink, then wash the plate 5 times with 1X Wash Buffer as in step 4. For this final wash, soak wells in 1X Wash Buffer for 30 seconds to 1 minute for each wash. This will help minimize background.

Add 100µL of Substrate Solution F to each well and incubate at room temperature for 15 minutes in the dark.* Wells containing α-synuclein aggregates should turn blue in color with an intensity proportional to its concentration. It is not necessary to seal the plate during this step.

Stop the reaction by adding 100 μL of Stop Solution to each well. The

solution color should change from blue to yellow.

Read plate immediately using ClarioStar plate reader

Equipment

Value	Label
Microplate Reader	NAME
BMG Labtech CLARIOstar	BRAND
None	SKU

Basic settings

Measurement type: Luminescence

Microplate name: SBS STANDARD 96

Endpoint settings

Measurement interval time [s]:0.35

Scan mode: orbital averaging

Scan diameter [mm]:4

Optic settings

Emission: No filter

Gain:2000

Well(s) used for gain adjustment:A1

Focal height [mm]:12

General settings

Top optic used

To allow comparison of measurements with different measurement interval times values are normalized to 0.5 sec.

Aperture spoon:-

Injection needle holder type:-

Reading direction: bidirectional, horizontal left to right, top to bottom

Target temperature [°C]:set off

Target concentration O2 [%]:set off

Target concentration CO2 [%]:set off

Example signal AUs:

Extrapolate standard curve values to recreate a linear regression curve and extract an equation to use for defining concentration of the experimental samples

Example standard curve: